Yeh that’s definitely the issue then. 1000 grit is faaaaaar too fine, that won’t give any adhesion at all. With epoxy, you want to be using 80 grit to scuff it for mechanical adhesion. BUT, with a gelcoat you don’t want to be sanding it at all. First of all you still won’t get the same level of adhesion as you would with a chemical bond, and secondly if you scuffed it with 80 grit to get a sufficient bond then the gelcoat would no longer be clear and defeats the purpose. It NEEDS to be done while the resin is in a tacky state.
As for your parts, I don’t think the look TOO bad for wet-layed parts. If you’re drawing resin out of the part while it’s under vacuum, why not clamp off the hose?
Wildcard, apologies, I hadn’t seen that photo. You’re possibly correct about that, though with the cost of Frekote’s sealer I personally prefer to just get the mould to a better finish haha! Having an inadequate bond to the gelcoat layer is also likely to have caused some issues there.